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Using Your CPAP Machine With a Cold or Flu

Using Your CPAP Machine With a Cold or Flu

Should you keep using your CPAP when you are ill? A practical, clinically grounded guide for UK CPAP users when to continue, when to pause, how to adjust your setup, and how to clean your equipment thoroughly after recovery.

10 min read CPAP Therapy & Illness United Kingdom


Getting a cold or flu when you rely on CPAP therapy puts you in an uncomfortable position. Your nose is blocked, your throat is sore, breathing through a mask feels harder than usual and you may be wondering whether using your device is doing more harm than good. The answer for most people, most of the time, is to continue. But how you use your CPAP during illness matters enormously. This guide explains exactly what to do, what to change, and how to protect your equipment and yourself.

Should You Keep Using CPAP When You Are Ill?

The short answer, for most CPAP users with a common cold or mild to moderate influenza, is yes continue using your therapy if at all possible. This is the consistent advice of UK sleep clinicians and respiratory specialists, and the reasoning is straightforward.

Sleep apnoea does not take a break because you are unwell. In fact, illness often makes OSA temporarily worse nasal congestion increases upper airway resistance, inflammation in the throat narrows the airway further, and the poor sleep quality that accompanies illness reduces upper airway muscle tone. All of these factors compound the underlying condition. Stopping CPAP therapy during illness means losing the one mechanism that is actively keeping your airway open, at precisely the time when your airway is most at risk.

There is also the matter of oxygen saturation. During a respiratory illness, particularly influenza or a chest infection, blood oxygen levels can drop more readily during sleep. Your CPAP device helps maintain the respiratory mechanics that support adequate oxygenation. Abandoning therapy removes this protection.

That said, there are specific circumstances where a brief pause may be appropriate, and there are meaningful adjustments you can make to your setup that will make using CPAP during illness considerably more manageable.

▶ Continue CPAP if…

  • You have a common cold with nasal congestion
  • You have mild to moderate flu symptoms
  • You can breathe adequately through nose or mouth
  • You have a nasal mask and can switch to full face
  • Your humidifier is functioning and set higher
  • Symptoms are upper respiratory only (no chest)
  • You feel well enough to attempt sleep with mask
  • Your sleep clinic has advised continuing during illness

▶ Consider pausing and seek advice if…

  • You have a severe chest infection or pneumonia
  • You are completely unable to breathe through nose or mouth with mask
  • You are vomiting (aspiration risk with mask on)
  • You have a very high fever with confusion or delirium
  • Your GP or respiratory team has specifically advised stopping
  • You cannot clean the device and are at high infection risk
  • Wearing the mask is causing significant distress or worsening symptoms
💡 If in doubt, contact your sleep clinic. Most NHS sleep services have an advice line or can be reached via your GP for CPAP-related queries. If you are seriously unwell and unsure whether to continue therapy, always seek clinical advice rather than making the decision independently. If you stop therapy, even briefly, restart as soon as you are able.

Why Illness Makes CPAP Harder and What Changes

Understanding what is happening physiologically during a cold or flu helps explain why CPAP feels different when you are unwell, and points toward the practical solutions that help.

AIRWAY DURING ILLNESS Inflamed mucosa Excess mucus ↑ Airway resistance ↑ AHI risk ↓ Sleep quality Congestion narrows the airway further + CPAP KEEPS AIRWAY OPEN ↓ Apnoea events ↑ SpO₂ maintained ↑ Better recovery sleep Positive pressure splints the airway open despite congestion
Illness inflames and narrows the airway, increasing resistance and the risk of obstructive events. CPAP counteracts this by maintaining positive pressure that splints the airway open making therapy even more important when you are unwell, not less.

Nasal Congestion and Increased Resistance

The most common CPAP challenge during a cold is nasal congestion. When the nasal passages are swollen and filled with mucus, airflow resistance increases significantly. For users of nasal masks or nasal pillow masks, this means breathing feels harder than usual, and the temptation to remove the mask is strong. In Auto CPAP users, the device may also increase its delivered pressure in response to the higher resistance and increased partial obstructions, which can itself feel uncomfortable.

Mouth Breathing and Mask Leaks

Nasal congestion frequently forces mouth breathing during illness. This creates a significant problem for nasal mask users: pressurised air delivered through the nose escapes immediately through the open mouth, rendering therapy largely ineffective and causing a disruptive, noisy air leak. For the duration of the illness, switching to a full face mask which covers both nose and mouth is often the most practical solution.

Sore Throat and Mask Discomfort

Flu and some cold viruses cause significant throat inflammation. Breathing pressurised air through an already sore and inflamed throat can amplify discomfort. Increasing your humidifier setting to maximum, using a heated tube if available, and ensuring your machine has not defaulted to a lower humidifier setting are all practical steps that reduce this effect.

Disrupted Sleep and Altered Breathing Patterns

Illness disrupts normal sleep architecture. Fever, coughing, and body aches all fragment sleep, and the resulting changes in breathing pattern mean your device data during illness will almost always look different from your healthy baseline higher AHI, more leaks, more pressure variability. This is normal and expected. Do not be alarmed by a few poor nights in your MyAir data; monitor the trend over the week rather than each individual night.

Adjusting Your CPAP Setup During Illness

Several practical adjustments can make a significant difference to comfort and therapy effectiveness when you are unwell. None of these require changes to your prescribed CPAP pressure they are changes to the delivery method and ancillary settings.

🙀
Switch to a Full Face Mask

If you normally use a nasal mask or nasal pillows, switch to a full face mask for the duration of the illness. Mouth breathing will otherwise defeat your therapy entirely.

💧
Maximise Humidification

Turn your humidifier to its highest comfortable setting. Warm, moist air soothes inflamed airways, loosens mucus, and reduces the throat irritation that makes CPAP feel uncomfortable when ill.

🧰
Nasal Rinse Before Bed

A saline nasal rinse or spray immediately before putting on your mask can temporarily clear congestion, making it easier to breathe through the nose and improving mask seal and comfort.

Humidifier Settings During Illness

Your CPAP humidifier is one of your most valuable allies during a respiratory illness. Warm, humidified air helps in several ways: it reduces dryness and irritation in the already inflamed nasal passages and throat, helps loosen and thin mucus making it easier to clear, and makes the experience of wearing the mask and breathing pressurised air far more comfortable when your airways are inflamed.

During illness, increase your humidifier setting to a level that provides clear comfort benefit without causing condensation in your tubing (rainout). If you experience rainout water collecting and gurgling in the tube reduce the setting by one step or switch to a heated tube if available. A heated tube (such as the ResMed ClimateLineAir) allows you to run higher humidity without condensation and is particularly valuable during winter respiratory illnesses.

Using Decongestants and Nasal Sprays

Over-the-counter nasal decongestants both oral medications such as pseudoephedrine and topical sprays such as xylometazoline (Otrivine) can be a useful short-term tool for CPAP users with significant congestion. By temporarily reducing nasal swelling, they can restore nasal airflow and allow continued use of a nasal mask.

However, topical decongestant sprays should not be used for more than five to seven consecutive days, as rebound congestion (rhinitis medicamentosa) can develop and worsen the problem. Steroid nasal sprays such as beclomethasone (Beconase) or fluticasone (Flixonase), available over the counter in the UK are a safer option for managing congestion over a longer period and are suitable for regular use. Discuss ongoing nasal congestion management with your GP if it is a persistent issue.

Sleeping Position During Illness

Sleeping with your head slightly elevated using an additional pillow or raising the head of your bed can help reduce nasal congestion by using gravity to encourage drainage from the nasal passages. This simple adjustment often makes nasal breathing and mask use easier, and also reduces postnasal drip that can aggravate a sore throat overnight.

Managing Your CPAP Data During Illness

If you monitor your therapy via the ResMed MyAir app or review your device data, you should expect to see changes in your numbers during a period of illness. Understanding what is normal variation versus what requires action helps prevent unnecessary anxiety or inappropriate self-adjustment.

What Your Device Data Typically Shows During a Cold or Flu
📈 Changes You Can Expect
Normal Variation
Higher AHI than your baseline · More pressure variability in AutoCPAP · Increased leak rate (mouth breathing) · Lower MyAir score · Shorter usage hours if you remove the mask overnight · These are expected responses to illness not a sign that therapy has stopped working.
⚠ Signs to Act On
Seek Advice
AHI remaining very high (>15/hr) for more than 5–7 nights after illness resolves · Persistent worsening of daytime sleepiness beyond the acute illness period · Any new symptoms such as chest pain, severe breathlessness, or SpO₂ below 90% contact your GP or sleep clinic promptly.
📋 Do not adjust your prescribed CPAP pressure during illness. It may seem logical to increase your pressure setting to compensate for increased airway resistance during congestion, but this is not recommended without clinical guidance. Auto CPAP devices adjust within their prescribed range automatically. Fixed CPAP devices should remain at their prescribed setting. Changing pressure settings without clinical oversight can be counterproductive and may affect your data review at the next appointment.

CPAP Mask and Equipment Hygiene During Illness

Your CPAP mask, tubing, and humidifier chamber come into very close contact with your airways during every therapy session. During a respiratory illness, these components become contaminated with the viruses and bacteria responsible for your infection. Thorough and prompt hygiene is essential both during the illness to prevent reinfection, and particularly after recovery to ensure you are not re-exposing yourself to pathogens trapped in the equipment.

Clean your mask cushion daily during illness

During a cold or flu, wash your mask cushion, frame, and nasal pillows daily with warm water and mild unscented soap. This removes the viral and bacterial load that accumulates with every night’s use. Allow to air dry completely before the next session.

Empty and rinse the humidifier chamber daily

During illness, mucus and respiratory secretions can be carried back into the humidifier water by the reverse airflow that occurs when you remove your mask. Empty, rinse, and refill the chamber with fresh distilled water every single morning without exception.

Wipe down the tubing exterior daily

The outside of the delivery tubing should be wiped with a damp cloth daily. While the interior of heated tubing is difficult to clean during regular use, ensure it is thoroughly washed with warm soapy water and rinsed after recovery.

Do not share your mask or equipment with anyone

CPAP equipment is intensely personal. Never allow another person to use your mask, tubing, or humidifier chamber, and particularly not during or immediately after a respiratory illness. Cross-contamination with respiratory pathogens via CPAP equipment is a real risk.

Consider replacing your filter after illness

The air inlet filter on your CPAP device captures particles and pathogens from room air. After a significant respiratory illness, replacing the filter (if your device uses a replaceable type) is a sensible precaution. Check your device manual for the filter location and replacement guidance.

The Deep Clean: After Your Illness Clears

Once you have fully recovered, carrying out a thorough deep clean of all your CPAP equipment is essential before returning to your regular maintenance routine. This ensures that no viral or bacterial material remains in the system that could cause a re-infection or contaminate the equipment going forward.

  • Mask cushion, frame, and headgear: Wash thoroughly in warm water with mild unscented soap, rinse completely, and allow to air dry in a clean environment away from direct sunlight. If the cushion shows any discolouration or feels tacky, consider replacing it illness is a common prompt for early cushion replacement.
  • Delivery tubing: Flush warm soapy water through the full length of the tube, rinse thoroughly by running clean water through several times, and hang vertically to dry completely. Do not use the tubing again until it is fully dry internally to prevent mould growth.
  • Humidifier water chamber: Wash with warm soapy water, paying attention to any scale deposits. Rinse thoroughly, allow to air dry completely, and refill with fresh distilled water before the first post-illness therapy session. If the chamber has any residual discolouration or odour, replace it.
  • Device exterior: Wipe the full exterior of the CPAP machine with a slightly damp cloth, paying attention to the air inlet area. Do not allow any moisture to enter the device’s internal components.
⚠ Never use bleach, strong disinfectants, or alcohol-based products on silicone mask components. These substances degrade silicone cushions, alter their sealing properties, and can cause skin irritation. For equipment that has been through a significant illness, mild unscented soap and warm water is still the correct cleaning agent. If you feel a stronger clean is necessary, dedicated CPAP cleaning products are available but always check compatibility with your specific mask model before use.
Post-Illness Equipment Recovery — Cleaning Frequency DURING ILLNESS — DAILY ✓ Mask cushion wash ✓ Humidifier chamber empty & refill AFTER RECOVERY — FULL DEEP CLEAN ✓ All components washed & dried ✓ Tubing flushed & hung to dry ✓ Tubing exterior wipe daily ✓ No equipment sharing — ever ✓ Filter check & replace if needed ✓ Chamber inspected — replace if discoloured
During illness: clean mask cushion and humidifier chamber daily. After recovery: complete deep clean of all components before resuming normal maintenance routine.

Common Symptoms and Practical Solutions

Symptom What Is Happening Practical Solution
Cannot breathe through nose Nasal congestion blocking nasal passage Switch to full face mask; use saline nasal rinse before bed; short-term decongestant spray
Mask leaking badly Mouth breathing breaking nasal mask seal Switch to full face mask for duration of illness
Sore, dry throat in the morning Dry air worsening inflamed throat Increase humidifier to maximum; add heated tube if available
AHI much higher than normal Congestion increasing airway resistance Continue therapy; treat congestion; Auto CPAP will adjust automatically. Review if persists post-recovery
Coughing with mask on Postnasal drip or throat irritation Elevate head with extra pillow; increase humidification; saline gargle before bed
Condensation in tubing (rainout) High humidity + cool tubing Reduce humidifier by one step, or switch to heated tube
Very low MyAir score during illness Disrupted data from illness effects Expected and normal monitor trend over full recovery week, not individual nights
Nausea or vomiting with mask on Flu-related gastrointestinal symptoms Remove mask immediately; pause therapy until vomiting has fully resolved; restart when stable

When to Seek Medical Advice

While most CPAP users manage a common cold or flu at home without complications, there are warning signs that warrant prompt medical attention particularly for those with underlying respiratory conditions such as COPD, asthma, heart failure, or obesity hypoventilation syndrome, for whom respiratory infections carry a higher risk.

  • Severe breathlessness at rest — difficulty breathing while sitting still, not just on exertion, requires same-day medical assessment
  • Chest pain — any new chest pain during a respiratory illness should be assessed promptly to exclude cardiac causes
  • SpO₂ consistently below 90% — if you have a pulse oximeter and your readings are persistently below 90% during waking hours, contact your GP or call 111
  • Confusion or marked drowsiness during the day — in patients with CO₂ retention risk (COPD, OHS), this may indicate hypercapnia and requires urgent assessment
  • Symptoms lasting more than ten to fourteen days without improvement — may indicate a secondary bacterial infection requiring antibiotic treatment
  • High fever not responding to paracetamol or ibuprofen — persistent high fever in a patient with underlying respiratory disease warrants clinical review
🕑 Restart CPAP therapy as soon as you are able. If you do pause therapy during a severe illness, do not delay restarting. Even a break of a few nights allows the compensatory muscle tone and sleep architecture improvements gained from therapy to begin reversing. As soon as you feel well enough to attempt a full night with your mask even if your nose is not fully clear restart. A partial night with the mask is always better than none.

Frequently Asked Questions

Will using my CPAP spread my cold to my partner?
Your CPAP machine itself does not generate droplets that could spread infection to a person sharing your room the exhaled air is vented through the mask’s exhalation port (for standard masks) or diffused quietly through the machine’s vent system. However, the close proximity of a shared bed means respiratory virus transmission during illness is possible via normal respiratory droplets regardless of CPAP use. Standard advice applies: cover your mouth when coughing or sneezing, wash hands regularly, and consider whether it is practical to sleep separately for the duration of the illness if your partner is particularly vulnerable.
Can I use a CPAP sanitising device (like a SoClean) instead of washing during illness?
Ozone-based CPAP sanitising devices such as SoClean are marketed as alternatives to manual cleaning. However, neither the NHS nor most CPAP device manufacturers recommend these as a substitute for soap-and-water cleaning, particularly during illness. During a respiratory infection, the volume of mucus and secretions on CPAP components is significantly higher than normal, and physical washing with warm soapy water is more effective at removing this material than ozone exposure alone. Use manual cleaning during illness, and if you choose to use a sanitiser as a supplementary step post-recovery, ensure your equipment is fully dry before doing so.
My nose is completely blocked is it safe to use a full face mask I have never used before?
If you have a full face mask from your CPAP supplier that fits your device, yes using it during illness is entirely safe and clinically sensible if nasal breathing is not possible. If you do not have a full face mask and your nasal mask has become ineffective due to congestion, contact your CPAP equipment supplier or NHS respiratory service. Many services can provide a temporary full face mask on loan, or your supplier may be able to arrange one quickly. In the meantime, using your nasal mask with a chin strap to reduce mouth leaks, or propping yourself up to reduce congestion, can help manage a single night.
Disclaimer: This article is intended for general informational and educational purposes only. It does not constitute medical advice and should not replace guidance from a qualified healthcare professional. If you are seriously unwell, have underlying respiratory or cardiac conditions, or are uncertain whether to continue CPAP therapy during illness, always consult your GP, respiratory specialist, or sleep clinic.
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